Overview gives a one-page tour of some of the features of Chromaseq, with images.The following sections provide introductory information about Chromaseq: In addition, there are a few other tools in Chromaseq that aid with GenBank submission, chromatogram organization, and data visualization.ģ.3 or later, as well as Phred and Phrap. Edit the base calls in a chromatogram viewer.View the chromatograms for each sequence by touching a special tool on that sequence in Mesquite's matrix editor.Sequences into Mesquite, and have Chromaseq automatically trim them, adjust base calls as appropriate, etc. Assemble them into contigs (with the help of Phred and Phrap). O rganize a directory of chromatograms into subdirectories corresponding to genes and samples.With Chromaseq installed, and the programs Phred and Phrap, you can: Package integrates the processing of chromatograms within Mesquite. Chromaseq: a package for processing chromatograms and sequence data in Mesquiteĭavid R.
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